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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939596.1_cds_XP_016484132.1_75178
CDS Infomation

[gene=LOC107804714] [db_xref=GeneID:107804714] [protein=serine/threonine-protein kinase Nek6-like] [protein_id=XP_016484132.1] [location=complement(join(34645..35787,35872..35923,36051..36124,36261..36310,36394..36475,36792..36841,36923..36965,37042..37122,37226..37271,37868..37914,38028..38093,40446..40512,40918..41015))] [gbkey=CDS]
Sequence

ATGGAGACTCGGATTGATGATTATGAAGTGATACAACAGTTGGAAAGAAGAGCTTTTGGA
ACTGCATTTCTTGTTCTCCATCGAACTGATAAGAAGAAGTATGTTCTGAAGAAAATACCA
TTAGCAAAACAGACAGAAAAGTCCAAGCGTGCTGTAAATCTGGAGATGAATGCGATAGCT
AAATTAAGCCATCCATATATTTTGGAGTACAAAGATGCTTGGATGGACAAGGGGAGCTGT
ATATGCACCGTTACCAATTATTGTGAAGATGAAGACATGACAGAGATCATAAGGAAGTCC
AGAGGAGCACTTTTTCCTGAAGAGAAACTCTGCAAATGGCTGACTCAGCTATTATTAGCT
TTGGAGCATCTGCATTCCAACCGCATTCATCATAGAGATCTTAAGCTGTGTAACATATTC
ATCACAAAGGACAATGACATCCGGTTAGGTGGTTTTGGATTAGCAAAATTTACAGATGCA
GAAGGCTTTGCTTCCTCGGCTGCTGGCACTTCAAGCAACATGTGCCCTGAGCTCCTTGAT
GGTATACCCTATGGCTACAAATCTGATATATGGTCGCTTGGATGCTGCATGTTTGAGATT
GCCACACATCAACCACCATTTAGAGCTCCTGACAAGACTGGACTTATCAACAAAATAAAC
CGGGGTTCTTTGTCACCACTTCCGATTATATACTCCTCCACCATGAAACAGATAATAAAG
AGCATGCTAAGGAAAAATTCAGAACACAGAACTACGGCTGCCGAGTTGTTAAGGCATCAA
CATTTGCAACCATACCTCCTCTTGTGTCACAACCCTTCATCCGCGTTTCTTCCAGTGAAG
TCCCCAAGCAGCACAAAAGAGAGAGCAAGACCATCACCTGGAAAATCTAGCAGTCCTAAA
TATAGCAGAGACAGACAGTTGAGGCTAAAAGAGAAGAGACCTGTCCTTTACTTTGATGAA
AGTGATAACATAATGCCGTGGAACTTATCAGACAATTATAGTACGTTCAAAGCCAAACTT
GAGACTAAGAGAGTTGATCCAACAAGCTACTCAGTTAGGATCTCTCAAGATAGTGAGGAT
TCTAAAAGGGGGGAGACGAGTGAGGCAGCTGTTTGCTATGGAGATGATCAAACTGAGAGA
CTCTTGCAAATGGGAAGTACGAATACACCAAACTTTTCCAGTTCAAGGGCAAAAACATGG
TCCGAGGAACTAGAGCATGCTTCTCCTGAGCATGTTAAACAATTTGAAAAGTGTGATAGG
GAGAGTTGCGAAACAAAAGAGCTTGAGGTGTTGAGCAGTCCAGCAGACAATGAGGAAGCT
GAGACAAATGTAGTGGAAGGTATCTCCGGAAAGCCTCGCGGAATGACATTGTCTAGTGAA
AGCTGCAGCATTAAAACACGGTGCTTTGATGAAGAAAGCACTTCATCAAATTCGCAGCCG
GCAAAACCAGATTCCGTGGCAGAACCAAGGTGCTATGCCACTGATACTGAAAATGGTAGT
GAGAGTAGAGAAGTTTCTATTGACTGCATGTCAACTGAAAGCAATGGTTCACTTGTACAT
AAAGATGAGCTAGAAAAGAAAGCGACGATGGTTAATGACACGAAACAGGCTAAAAAAGAT
GCTCTTCAAGCACTGGATGATAAGGTTTCACAGCTCAAGTCACTAGCCGCATTAGCTAGT
AACGAGCGCAAAGATGATTGGGGGAATTCCACTCAACAAAGAGCTGAAGCTCTAGAGTCT
CTTTTGGAGGTTTGTGCACGACTACTTAAGCAGGAAAAGATCGATGAGCTTGCAGGTGTG
CTGAAACCATTTGGGGATGACGGAATGTCATCTAGAGAGACAGCAATCTGGTTGACAAAA
AGCCTCATGACTGCGCAAAAGTTGGCCAAGGGATCGTGA

Peptide Sequence

PEP ID

XP_016484132.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase Nek6-like [Nicotiana tabacum]
Sequence

METRIDDYEVIQQLERRAFGTAFLVLHRTDKKKYVLKKIPLAKQTEKSKRAVNLEMNAIA
KLSHPYILEYKDAWMDKGSCICTVTNYCEDEDMTEIIRKSRGALFPEEKLCKWLTQLLLA
LEHLHSNRIHHRDLKLCNIFITKDNDIRLGGFGLAKFTDAEGFASSAAGTSSNMCPELLD
GIPYGYKSDIWSLGCCMFEIATHQPPFRAPDKTGLINKINRGSLSPLPIIYSSTMKQIIK
SMLRKNSEHRTTAAELLRHQHLQPYLLLCHNPSSAFLPVKSPSSTKERARPSPGKSSSPK
YSRDRQLRLKEKRPVLYFDESDNIMPWNLSDNYSTFKAKLETKRVDPTSYSVRISQDSED
SKRGETSEAAVCYGDDQTERLLQMGSTNTPNFSSSRAKTWSEELEHASPEHVKQFEKCDR
ESCETKELEVLSSPADNEEAETNVVEGISGKPRGMTLSSESCSIKTRCFDEESTSSNSQP
AKPDSVAEPRCYATDTENGSESREVSIDCMSTESNGSLVHKDELEKKATMVNDTKQAKKD
ALQALDDKVSQLKSLAALASNERKDDWGNSTQQRAEALESLLEVCARLLKQEKIDELAGV
LKPFGDDGMSSRETAIWLTKSLMTAQKLAKGS

Transcript Sequence

Gene sequence data has not been registered.